#include "l1_input.h"
#include "filehandle.h"
#include "l2_flags.h"
#include <clo.h>
#include <genutils.h>
#include <timeutils.h>
#include <libnav.h>
#include <stdint.h>
#include <stdbool.h>
#include "uncertainty.h"

Include dependency graph for l1.h:

Classes
struct	geom_struc_def

struct	anc_add_struc_def

struct	anc_aer_struc_def

struct	cld_dat_struc_def

struct	cld_rad_dat_struct_def

struct	l1_struct

Macros
#define	INSTITUTION "NASA Goddard Space Flight Center, Ocean Ecology Laboratory, Ocean Biology Processing Group"

#define	LICENSE "https://science.nasa.gov/earth-science/earth-science-data/data-information-policy/"

#define	NAMING_AUTHORITY "gov.nasa.gsfc.sci.oceandata"

#define	KEYWORDS_VOCABULARY "NASA Global Change Master Directory (GCMD) Science Keywords"

#define	STDNAME_VOCABULARY "CF Standard Name Table v36"

#define	CREATOR_NAME "NASA/GSFC/OBPG"

#define	CREATOR_EMAIL "data@oceancolor.gsfc.nasa.gov"

#define	CREATOR_URL "https://oceandata.sci.gsfc.nasa.gov"

#define	PROJECT "Ocean Biology Processing Group (NASA/GSFC/OBPG)"

#define	PUBLISHER_NAME "NASA/GSFC/OBPG"

#define	PUBLISHER_EMAIL "data@oceancolor.gsfc.nasa.gov"

#define	PUBLISHER_URL "https://oceandata.sci.gsfc.nasa.gov"

#define	MIN(a, b) (((a)<(b)) ? (a) : (b))

#define	MAX(a, b) (((a)>(b)) ? (a) : (b))

#define	PI 3.141592654

#define	RADEG 57.29577951

#define	OFF 0

#define	ON 1

#define	NO 0

#define	YES 1

#define	SUCCESS 0

#define	FATAL_ERROR 1

#define	LONLAT_ERROR 110

#define	MAXPIX 10000

#define	BANDW 10

#define	BT_LO -1000

#define	BT_HI 1000

#define	SOLZNIGHT 90.0

#define	SOLZNIGHTA 80.0

#define	GLINT_MIN 0.0001

#define	AGZONE0 0

#define	AGZONE1 640

#define	AGZONE2 1008

#define	AGZONE3 1600

#define	AGZONE4 2192

#define	AGZONE5 2560

#define	STDPROC 0 /* evalmask bit definitions */

#define	OLDAERMOD 1 /* init to old aerosol models */

#define	MODCLOUD 2 /* enables MODIS/MERIS cloud mask algorithm */

#define	MODCIRRUS 16 /* enables MODIS cirrus mask */

#define	NEWSENSINFO 32 /* use test sensor info file */

#define	NEWRAYTAB 64 /* use test rayleigh tables */

#define	NEWAERTAB 128 /* use test aerosol tables */

#define	NEWPOLTAB 256 /* use test polarization tables */

#define	MSKMODMIR1 1024 /* mask modis mirror-side 1 (navfail) */

#define	MSKMODMIR2 2048 /* mask modis mirror-side 2 (navfail) */

#define	SSTMODS 4096 /* reserved for testing SST changes */

#define	ALTSENSORINFO 8192 /* use .alt sensor infor file in eval */

#define	TRANSSPHER 32768 /* enables spherical path geom for dtran */

#define	XCALRVS 1

#define	XCALPOL 2

#define	XCALOLI 4

Functions
void	l1_input_init ()

void	l1_input_delete (l1_input_t *input)

void	l1_add_options (clo_optionList_t *list)

void	l1_read_default_files (clo_optionList_t list, filehandle l1file, const char *ifile)

void	l1_load_options (clo_optionList_t list, filehandle l1file)

void	l1_get_input_params (filehandle l1file, char input_parms)

void	l1_get_input_files (filehandle l1file, char input_files)

void	bindex_set (int32_t wave[], int nwave, int dwave_vswir)

int	bindex_get (int32_t wave)

int	bindex_get_555 (void)

int	windex (float wave, float twave[], int ntwave)

int	invbindx (int band, int32_t *bindx, int nbands)

void	radiance2bt (l1str *l1rec, int resolution)

void	flag_bowtie_deleted (l1str *l1rec, size_t ipix, int extract_offset)

int	get_f0_neckel (int32_t wl, int32_t width, float *f0)

int	get_f0_thuillier (int32_t wl, int32_t width, float *f0)

void	get_f0_thuillier_ext (int32_t wl, int32_t width, float *f0)

int	init_geom_per_band (l1str *)

int	geom_per_band_deriv (l1str *)

int	destroy_geom_per_band (geom_struc *)

void	init_l1 (l1str *l1rec)

int32_t	alloc_l1 (filehandle l1file, l1str l1rec)

void	free_l1 (l1str *l1rec)

int	openl1 (filehandle *l1file)

int	readl1 (filehandle l1file, int32_t recnum, l1str l1rec)

int	readl1_lonlat (filehandle l1file, int32_t recnum, l1str l1rec)

void	closel1 (filehandle *l1file)

void	closel1_generic (filehandle *l1file)

int	openl1_write (filehandle *l1file)

int	writel1 (filehandle l1file, int32_t recnum, l1str l1rec)

int	openl1_read_hdf (filehandle *l1file)

int	openl1_write_hdf (filehandle *l1file)

int	writel1_hdf (filehandle l1file, int32_t recnum, l1str l1rec)

void	closel1_hdf (filehandle *l1file)

int	l1subpix (filehandle l1file, l1str l1rec)

void	l1_mask_set (l1str *l1rec, int32_t ip)

int	setflags (l1str *l1rec)

void	setflagbits_l1 (int level, l1str *l1rec, int32_t ipix)

char	get_cldmask (l1str *l1rec, int32_t ip)

int	modis_cloud_mask (l1str *l1rec, int32_t ip)

int	get_sdps_cld_mask (l1str , int32_t, char )

Macro Definition Documentation

◆ AGZONE0

#define AGZONE0 0

Definition at line 64 of file l1.h.

◆ AGZONE1

#define AGZONE1 640

Definition at line 65 of file l1.h.

◆ AGZONE2

#define AGZONE2 1008

Definition at line 66 of file l1.h.

◆ AGZONE3

#define AGZONE3 1600

Definition at line 67 of file l1.h.

◆ AGZONE4

#define AGZONE4 2192

Definition at line 68 of file l1.h.

◆ AGZONE5

#define AGZONE5 2560

Definition at line 69 of file l1.h.

◆ ALTSENSORINFO

#define ALTSENSORINFO 8192 /* use .alt sensor infor file in eval */

Definition at line 83 of file l1.h.

◆ BANDW

#define BANDW 10

Definition at line 53 of file l1.h.

◆ BT_HI

#define BT_HI 1000

Definition at line 56 of file l1.h.

◆ BT_LO

#define BT_LO -1000

Definition at line 55 of file l1.h.

◆ CREATOR_EMAIL

#define CREATOR_EMAIL "data@oceancolor.gsfc.nasa.gov"

Definition at line 24 of file l1.h.

◆ CREATOR_NAME

#define CREATOR_NAME "NASA/GSFC/OBPG"

Definition at line 23 of file l1.h.

◆ CREATOR_URL

#define CREATOR_URL "https://oceandata.sci.gsfc.nasa.gov"

Definition at line 25 of file l1.h.

◆ FATAL_ERROR

#define FATAL_ERROR 1

Definition at line 49 of file l1.h.

◆ GLINT_MIN

#define GLINT_MIN 0.0001

Definition at line 60 of file l1.h.

◆ INSTITUTION

#define INSTITUTION "NASA Goddard Space Flight Center, Ocean Ecology Laboratory, Ocean Biology Processing Group"

Definition at line 18 of file l1.h.

◆ KEYWORDS_VOCABULARY

#define KEYWORDS_VOCABULARY "NASA Global Change Master Directory (GCMD) Science Keywords"

Definition at line 21 of file l1.h.

◆ LICENSE

#define LICENSE "https://science.nasa.gov/earth-science/earth-science-data/data-information-policy/"

Definition at line 19 of file l1.h.

◆ LONLAT_ERROR

#define LONLAT_ERROR 110

Definition at line 50 of file l1.h.

◆ MAX

#define MAX	(	a,
		b
	)	(((a)>(b)) ? (a) : (b))

Definition at line 35 of file l1.h.

◆ MAXPIX

#define MAXPIX 10000

Definition at line 51 of file l1.h.

◆ MIN

#define MIN	(	a,
		b
	)	(((a)<(b)) ? (a) : (b))

Definition at line 32 of file l1.h.

◆ MODCIRRUS

#define MODCIRRUS 16 /* enables MODIS cirrus mask */

Definition at line 75 of file l1.h.

◆ MODCLOUD

#define MODCLOUD 2 /* enables MODIS/MERIS cloud mask algorithm */

Definition at line 74 of file l1.h.

◆ MSKMODMIR1

#define MSKMODMIR1 1024 /* mask modis mirror-side 1 (navfail) */

Definition at line 80 of file l1.h.

◆ MSKMODMIR2

#define MSKMODMIR2 2048 /* mask modis mirror-side 2 (navfail) */

Definition at line 81 of file l1.h.

◆ NAMING_AUTHORITY

#define NAMING_AUTHORITY "gov.nasa.gsfc.sci.oceandata"

Definition at line 20 of file l1.h.

◆ NEWAERTAB

#define NEWAERTAB 128 /* use test aerosol tables */

Definition at line 78 of file l1.h.

◆ NEWPOLTAB

#define NEWPOLTAB 256 /* use test polarization tables */

Definition at line 79 of file l1.h.

◆ NEWRAYTAB

#define NEWRAYTAB 64 /* use test rayleigh tables */

Definition at line 77 of file l1.h.

◆ NEWSENSINFO

#define NEWSENSINFO 32 /* use test sensor info file */

Definition at line 76 of file l1.h.

◆ NO

#define NO 0

Definition at line 45 of file l1.h.

◆ OFF

#define OFF 0

Definition at line 43 of file l1.h.

◆ OLDAERMOD

#define OLDAERMOD 1 /* init to old aerosol models */

Definition at line 73 of file l1.h.

◆ ON

#define ON 1

Definition at line 44 of file l1.h.

◆ PI

#define PI 3.141592654

Definition at line 39 of file l1.h.

◆ PROJECT

#define PROJECT "Ocean Biology Processing Group (NASA/GSFC/OBPG)"

Definition at line 26 of file l1.h.

◆ PUBLISHER_EMAIL

#define PUBLISHER_EMAIL "data@oceancolor.gsfc.nasa.gov"

Definition at line 28 of file l1.h.

◆ PUBLISHER_NAME

#define PUBLISHER_NAME "NASA/GSFC/OBPG"

Definition at line 27 of file l1.h.

◆ PUBLISHER_URL

#define PUBLISHER_URL "https://oceandata.sci.gsfc.nasa.gov"

Definition at line 29 of file l1.h.

◆ RADEG

#define RADEG 57.29577951

Definition at line 41 of file l1.h.

◆ SOLZNIGHT

#define SOLZNIGHT 90.0

Definition at line 58 of file l1.h.

◆ SOLZNIGHTA

#define SOLZNIGHTA 80.0

Definition at line 59 of file l1.h.

◆ SSTMODS

#define SSTMODS 4096 /* reserved for testing SST changes */

Definition at line 82 of file l1.h.

◆ STDNAME_VOCABULARY

#define STDNAME_VOCABULARY "CF Standard Name Table v36"

Definition at line 22 of file l1.h.

◆ STDPROC

#define STDPROC 0 /* evalmask bit definitions */

Definition at line 72 of file l1.h.

◆ SUCCESS

#define SUCCESS 0

Definition at line 48 of file l1.h.

◆ TRANSSPHER

#define TRANSSPHER 32768 /* enables spherical path geom for dtran */

Definition at line 84 of file l1.h.

◆ XCALOLI

#define XCALOLI 4

Definition at line 88 of file l1.h.

◆ XCALPOL

#define XCALPOL 2

Definition at line 87 of file l1.h.

◆ XCALRVS

#define XCALRVS 1

Definition at line 86 of file l1.h.

◆ YES

#define YES 1

Definition at line 46 of file l1.h.

Function Documentation

◆ alloc_l1()

int32_t alloc_l1	(	filehandle *	l1file,
		l1str *	l1rec
	)

Definition at line 18 of file alloc_l1.c.

◆ bindex_get()

int bindex_get ( int32_t wave )

Definition at line 45 of file windex.c.

◆ bindex_get_555()

int bindex_get_555 ( void )

Definition at line 57 of file windex.c.

◆ bindex_set()

void bindex_set	(	int32_t	wave[],
		int	nwave,
		int	dwave_vswir
	)

Definition at line 15 of file windex.c.

◆ closel1()

void closel1 ( filehandle * l1file )

Definition at line 73 of file l1_io.c.

◆ closel1_generic()

void closel1_generic ( filehandle * l1file )

Definition at line 768 of file l1_generic_write.c.

◆ closel1_hdf()

void closel1_hdf ( filehandle * l1file )

Definition at line 701 of file l1_hdf_generic_write.c.

◆ destroy_geom_per_band()

int destroy_geom_per_band ( geom_struc * )

◆ flag_bowtie_deleted()

void flag_bowtie_deleted	(	l1str *	l1rec,
		size_t	ipix,
		int	extract_offset
	)

Definition at line 876 of file l1_viirs_l1b.c.

◆ free_l1()

void free_l1 ( l1str * l1rec )

Definition at line 7 of file alloc_l1.c.

◆ geom_per_band_deriv()

int geom_per_band_deriv ( l1str * )

Definition at line 51 of file geom_per_band.c.

◆ get_cldmask()

char get_cldmask	(	l1str *	l1rec,
		int32_t	ip
	)

Definition at line 322 of file cloud_flag.c.

◆ get_f0_neckel()

int get_f0_neckel	(	int32_t	wl,
		int32_t	width,
		float *	f0
	)

Definition at line 5 of file get_f0.c.

◆ get_f0_thuillier()

int get_f0_thuillier	(	int32_t	wl,
		int32_t	width,
		float *	f0
	)

Definition at line 71 of file get_f0.c.

◆ get_f0_thuillier_ext()

void get_f0_thuillier_ext	(	int32_t	wl,
		int32_t	width,
		float *	f0
	)

Definition at line 137 of file get_f0.c.

◆ get_sdps_cld_mask()

int get_sdps_cld_mask	(	l1str *	,
		int32_t	,
		char *
	)

Definition at line 5 of file cloud_flag.c.

◆ init_geom_per_band()

int init_geom_per_band ( l1str * )

Definition at line 7 of file geom_per_band.c.

◆ init_l1()

void init_l1 ( l1str * l1rec )

Definition at line 11 of file init_l1.c.

◆ invbindx()

int invbindx	(	int	band,
		int32_t *	bindx,
		int	nbands
	)

Definition at line 106 of file windex.c.

◆ l1_add_options()

void l1_add_options ( clo_optionList_t * list )

Definition at line 77 of file l1_options.c.

◆ l1_get_input_files()

void l1_get_input_files	(	filehandle *	l1file,
		char *	input_files
	)

Definition at line 658 of file l1_options.c.

◆ l1_get_input_params()

void l1_get_input_params	(	filehandle *	l1file,
		char *	input_parms
	)

Definition at line 454 of file l1_options.c.

◆ l1_input_delete()

void l1_input_delete ( l1_input_t * input )

Definition at line 66 of file l1_options.c.

◆ l1_input_init()

void l1_input_init ( )

Definition at line 11 of file l1_options.c.

◆ l1_load_options()

void l1_load_options	(	clo_optionList_t *	list,
		filehandle *	l1file
	)

Definition at line 255 of file l1_options.c.

◆ l1_mask_set()

void l1_mask_set	(	l1str *	l1rec,
		int32_t	ip
	)

Definition at line 3 of file setflags_l1.c.

◆ l1_read_default_files()

void l1_read_default_files	(	clo_optionList_t *	list,
		filehandle *	l1file,
		const char *	ifile
	)

Definition at line 200 of file l1_options.c.

◆ l1subpix()

int l1subpix	(	filehandle *	l1file,
		l1str *	l1rec
	)

Definition at line 17 of file l1subpix.c.

◆ modis_cloud_mask()

int modis_cloud_mask	(	l1str *	l1rec,
		int32_t	ip
	)

◆ openl1()

int openl1 ( filehandle * l1file )

Definition at line 230 of file l1_io.c.

◆ openl1_read_hdf()

int openl1_read_hdf ( filehandle * l1file )

◆ openl1_write()

int openl1_write ( filehandle * l1file )

Definition at line 176 of file l1_generic_write.c.

◆ openl1_write_hdf()

int openl1_write_hdf ( filehandle * l1file )

Definition at line 502 of file l1_hdf_generic_write.c.

◆ radiance2bt()

void radiance2bt	(	l1str *	l1rec,
		int	resolution
	)

Definition at line 170 of file brightness.c.

◆ readl1()

int readl1	(	filehandle *	l1file,
		int32_t	recnum,
		l1str *	l1rec
	)

Definition at line 439 of file l1_io.c.

◆ readl1_lonlat()

int readl1_lonlat	(	filehandle *	l1file,
		int32_t	recnum,
		l1str *	l1rec
	)

Definition at line 640 of file l1_io.c.

◆ setflagbits_l1()

void setflagbits_l1	(	int	level,
		l1str *	l1rec,
		int32_t	ipix
	)

Definition at line 131 of file setflags_l1.c.

◆ setflags()

int setflags ( l1str * l1rec )

Definition at line 16 of file setflags_l1.c.

◆ windex()

int windex	(	float	wave,
		float	twave[],
		int	ntwave
	)

Definition at line 73 of file windex.c.

◆ writel1()

int writel1	(	filehandle *	l1file,
		int32_t	recnum,
		l1str *	l1rec
	)

Definition at line 649 of file l1_generic_write.c.

◆ writel1_hdf()

int writel1_hdf	(	filehandle *	l1file,
		int32_t	recnum,
		l1str *	l1rec
	)

Definition at line 618 of file l1_hdf_generic_write.c.

Classes

Macros

Functions