NASA Ocean Color

ocssw V2022
 /* Copyright (C) 2004 Marc Rehmsmeier, Peter Steffen, Matthias Hoechsmann */
  
 /* This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. */
  
 /* This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. */
  
 /* You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA */
  
 #ifndef globals_h
 #define globals_h
  
  
 #define MAXTARGET     2000
 #define MAXQUERY        30
 #define MAXLINE       1000
 #define MAXSEQUENCE 100000
  
 #define ILOOPUPPERLIMITDEFAULT 15
 #define BLOOPUPPERLIMITDEFAULT 15
  
 #define MEAN 500
 #define STDDEV 300
 #define SAMPLESIZE 5000
  
 #define MIRNA_LENGTH_MEAN 22
 #define MIRNA_LENGTH_STDDEV 0
  
 #define MAXTARGETNUMBER 100000
 #define MAXQUERYNUMBER 100000
  
 #define MAXORTHOLOGNUMBER 10
  
 #define BINNUMBER 500
 #define FITLOWERCUTOFFABSOLUTE 2.0
 #define FITUPPERCUTOFFPERCENT 1.0
  
 #define SETNAME_3UTR_FLY   "3utr_fly"
 #define SETNAME_3UTR_WORM  "3utr_worm"
 #define SETNAME_3UTR_HUMAN "3utr_human"
  
 #define XI_SLOPE_3UTR_FLY (-0.03144)
 #define XI_INTERCEPT_3UTR_FLY (0.7201)
 #define THETA_SLOPE_3UTR_FLY (-0.003429)
 #define THETA_INTERCEPT_3UTR_FLY (0.01634)
  
 #define XI_SLOPE_3UTR_WORM (-0.01074)
 #define XI_INTERCEPT_3UTR_WORM (1.769)
 #define THETA_SLOPE_3UTR_WORM (-0.001154)
 #define THETA_INTERCEPT_3UTR_WORM (0.1419)
  
 #define XI_SLOPE_3UTR_HUMAN (-0.01237)
 #define XI_INTERCEPT_3UTR_HUMAN (1.901)
 #define THETA_SLOPE_3UTR_HUMAN (-0.001678)
 #define THETA_INTERCEPT_3UTR_HUMAN (0.1349)
  
  
 #endif